halophFGD

Basic Information

Locus ID: Chr27G016640

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Serine threonine-protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000027	37721371	37721778	-	Chr27G016640

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF10551	MULE transposase domain	6	68	3.3E-11	IPR018289
ProSitePatterns	PS01007	Transposases, Mutator family, signature.	40	64	-	IPR001207

Gene Ontology

Biological Process:

GO:0006313 (DNA transposition)

Molecular Function:

GO:0003677 (DNA binding) GO:0004803 (transposase activity)

KEGG Pathway

KO Term:

K08286 (protein-serine/threonine kinase [EC:2.7.11.-])

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_020398214.1	uncharacterized protein LOC103639058 [Zea mays]	0
TrEMBL	A0A1D6GDZ0	RMUA OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d012923 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	3	AH02.3022, BH09.1174, CH01.3035
Poaceae	Lolium multiflorum	19	gene-QYE76_001585, gene-QYE76_001690, gene-QYE76_005059 ... gene-QYE76_006563, gene-QYE76_009163, gene-QYE76_009482, gene-QYE76_011325, gene-QYE76_013512, gene-QYE76_013713, gene-QYE76_014408, gene-QYE76_020185, gene-QYE76_020571, gene-QYE76_027308, gene-QYE76_028483, gene-QYE76_031179, gene-QYE76_036447, gene-QYE76_039846, gene-QYE76_048641, gene-QYE76_060628
Poaceae	Sporobolus alterniflorus	8	Chr02G026660, Chr03G003120, Chr07G005200, Chr09G014280 ... Chr09G014290, Chr15G007640, Chr15G007650, Chr27G016640