Basic Information
Locus ID:
Chr27G014540
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 35977820 | 35981303 | + | Chr27G014540 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 793 | 1061 | 1.92746E-92 | - |
| Pfam | PF00069 | Protein kinase domain | 790 | 986 | 2.3E-42 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 126 | 145 | 0.9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 33 | 70 | 1.5E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 574 | 633 | 4.9E-11 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 199 | 221 | 0.47 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 767 | 1058 | 6.2E-74 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 94 | 662 | 9.52E-66 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 475 | 686 | 5.8E-48 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 192 | 7.1E-41 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 863 | 1067 | 2.0E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 750 | 862 | 1.2E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 296 | 470 | 4.8E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 193 | 289 | 2.1E-23 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 596 | 619 | 0.83 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 620 | 643 | 23.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 171 | 195 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 245 | 269 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 197 | 221 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 124 | 147 | 15.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 787 | 1065 | 6.6E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 787 | 1069 | 39.19854 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 907 | 919 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 793 | 815 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02130.2 | - | 0 |
| RefSeq | XP_039792690.1 | LRR receptor-like serine/threonine-protein kinase RPK2 [Panicum virgatum] | 0 |
| Q9S7I6 | LRR receptor-like serine/threonine-protein kinase RPK2 OS=Arabidopsis thaliana OX=3702 GN=RPK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8T0VSP2 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG577400 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology