Basic Information
Locus ID:
Chr27G011970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 33528697 | 33530473 | + | Chr27G011970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 23 | 122 | 6.1E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 147 | 234 | 8.3E-12 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 297 | 378 | 6.4E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 273 | 382 | 1.54E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 135 | 237 | 4.9E-18 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 254 | 368 | 8.4E-38 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 20 | 124 | 4.9E-13 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 18 | 124 | 13.592178 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 131 | 238 | 14.560753 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 293 | 384 | 14.294435 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_025800484.1 | cysteine-rich receptor-like protein kinase 6 [Panicum hallii] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VS38 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_12032 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH03.3238, BH03.3419, BH03.3423, BH03.3425 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_7AG0570310, gene-QOZ80_7BG0602060 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0139070.1 |
| Poaceae | Oryza coarctata | 2 | Oco13G009180, Oco14G009600 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_02G300500 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0304235 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr19G005290, Chr27G011970 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G406000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG028920, gene_TRIDC2AG028930 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G217600.1, TraesCS2B02G243100.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb106320_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-822 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g6568 |