Basic Information
Locus ID:
Chr27G009530
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 30539818 | 30540363 | + | Chr27G009530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 28 | 176 | 7.83045E-61 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 152 | 2.8E-32 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 26 | 176 | 1.31E-41 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 25 | 177 | 7.6E-45 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 177 | 2.9E-24 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 156 | 181 | 1.7 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 156 | 1.8E-42 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 176 | 25.758133 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 47 | 56 | 9.3E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 69 | 80 | 9.3E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 81 | 110 | 9.3E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 9.3E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 119 | 135 | 9.3E-39 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 167 | 176 | 9.3E-39 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_034588374.1 | thaumatin-like protein [Setaria viridis] | 0 |
| P27357 | Thaumatin-like protein PWIR2 OS=Triticum aestivum OX=4565 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WKV1 | Thaumatin-like protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_00170 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology