Basic Information
Locus ID:
Chr27G009090
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase 5
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 30140873 | 30144024 | + | Chr27G009090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 313 | 351 | 8.14111E-5 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 40 | 104 | 2.1E-9 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 311 | 362 | 1.84E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 417 | 460 | 2.1E-6 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 316 | 363 | 5.2E-9 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 269 | 315 | 8.7E-6 | - |
| SMART | SM00179 | egfca_6 | 313 | 362 | 1.0E-9 | IPR001881 |
| SMART | SM00181 | egf_5 | 316 | 362 | 0.42 | IPR000742 |
| SMART | SM00181 | egf_5 | 263 | 312 | 56.0 | IPR000742 |
| ProSitePatterns | PS01187 | Calcium-binding EGF-like domain signature. | 313 | 346 | - | IPR018097 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_034584042.1 | wall-associated receptor kinase 1-like [Setaria viridis] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A368QNH3 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_3G393000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology