Basic Information
Locus ID:
Chr27G008770
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
HMT3
Description:
betaine-homocysteine S-methyltransferase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 29925355 | 29928787 | + | Chr27G008770 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02574 | Homocysteine S-methyltransferase | 25 | 325 | 2.1E-74 | IPR003726 |
| SUPERFAMILY | SSF82282 | Homocysteine S-methyltransferase | 15 | 328 | 2.35E-82 | IPR036589 |
| Gene3D | G3DSA:3.20.20.330 | - | 18 | 325 | 6.3E-100 | IPR036589 |
| PIRSF | PIRSF037505 | BHMT | 4 | 113 | 6.2E-6 | IPR017226 |
| PIRSF | PIRSF037505 | BHMT | 278 | 339 | 0.11 | IPR017226 |
| ProSiteProfiles | PS50970 | Homocysteine-binding domain profile. | 13 | 327 | 46.577194 | IPR003726 |
| Coils | Coil | Coil | 93 | 113 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63250.1 | homocysteine methyltransferase 2. Encodes a homocysteine methyltransferase (HMT). Among the three HMT coding genes in the genome, HMT2 is responsible for a significant proportion of HMT activity in the flower stalks and silique hulls. However, HMT2 does not significantly contribute to the total HMT activity in seeds. | 0 |
| RefSeq | XP_039802803.1 | homocysteine S-methyltransferase 3 [Panicum virgatum] | 0 |
| Q9FUM9 | Homocysteine S-methyltransferase 2 OS=Zea mays OX=4577 GN=HMT-2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A2T7EJ33 | Hcy-binding domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G466200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology