Basic Information
Locus ID:
Chr27G008350
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 29448616 | 29453885 | + | Chr27G008350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 774 | 1031 | 6.31183E-111 | - |
| CDD | cd06410 | PB1_UP2 | 40 | 135 | 9.81106E-43 | - |
| Pfam | PF00564 | PB1 domain | 56 | 136 | 6.9E-17 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 770 | 1031 | 4.3E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 756 | 1030 | 2.08E-77 | IPR011009 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 52 | 137 | 1.96E-20 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 57 | 138 | 3.1E-13 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 761 | 855 | 1.7E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 856 | 1039 | 1.4E-52 | - |
| SMART | SM00666 | PB1_new | 51 | 138 | 3.8E-27 | IPR000270 |
| SMART | SM00220 | serkin_6 | 768 | 1037 | 3.2E-56 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 768 | 1038 | 41.45998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 893 | 905 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 774 | 799 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 887 | 905 | 1.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 958 | 980 | 1.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 850 | 863 | 1.6E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1002 | 1024 | 1.6E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 614 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 268 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 585 | 611 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 257 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_002442438.2 | uncharacterized protein LOC8069730 isoform X1 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SJC9 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_55575 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology