Basic Information
Locus ID:
Chr27G005970
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Speckle-type POZ protein-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 26352444 | 26353455 | + | Chr27G005970 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 94 | 166 | 1.3E-11 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 94 | 168 | 5.89E-14 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 82 | 170 | 1.2E-18 | IPR011333 |
| Gene3D | G3DSA:1.25.40.420 | - | 177 | 245 | 3.3E-14 | - |
| SMART | SM00225 | BTB_4 | 24 | 179 | 0.0022 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 94 | 143 | 9.185853 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19000.1 | BTB-POZ and MATH domain 1. | 0 |
| RefSeq | XP_039803835.1 | BTB/POZ and MATH domain-containing protein 1-like [Panicum virgatum] | 0 |
| Q8L765 | BTB/POZ and MATH domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=BPM1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WS28 | BTB domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_01520 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology