Basic Information
Locus ID:
Chr27G005420
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
thaumatin-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 25393227 | 25394045 | + | Chr27G005420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09217 | TLP-P | 26 | 174 | 1.55396E-75 | - |
| Pfam | PF00314 | Thaumatin family | 30 | 140 | 7.4E-33 | IPR001938 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 23 | 174 | 2.49E-55 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 23 | 142 | 7.2E-45 | IPR037176 |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 143 | 174 | 1.2E-5 | IPR037176 |
| SMART | SM00205 | tha2 | 26 | 174 | 1.3E-38 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 141 | 174 | 0.0045 | IPR001938 |
| PIRSF | PIRSF002703 | PR5 | 1 | 144 | 3.5E-43 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 23 | 174 | 34.228775 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 25 | 37 | 1.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 45 | 54 | 1.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 114 | 130 | 1.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 164 | 173 | 1.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 79 | 108 | 1.8E-44 | IPR001938 |
| PRINTS | PR00347 | Pathogenesis-related protein signature | 67 | 78 | 1.8E-44 | IPR001938 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G11650.1 | osmotin 34. osmotin-like protein | 0 |
| RefSeq | XP_020160634.1 | thaumatin-like protein [Aegilops tauschii subsp. strangulata] | 0 |
| P31110 | Thaumatin-like protein OS=Oryza sativa subsp. japonica OX=39947 GN=Os12g0628600 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453DMK7 | Thaumatin-like protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology