Basic Information
Locus ID:
Chr27G003730
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
POT family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 21428774 | 21430905 | + | Chr27G003730 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04481 | RPA1_DBD_B_like | 107 | 195 | 1.03054E-15 | - |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 1 | 74 | 3.88E-7 | IPR012340 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 86 | 200 | 7.28E-12 | IPR012340 |
| SUPERFAMILY | SSF50249 | Nucleic acid-binding proteins | 224 | 343 | 2.64E-13 | IPR012340 |
| Gene3D | G3DSA:2.40.50.140 | - | 14 | 74 | 8.5E-7 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 215 | 349 | 2.5E-13 | - |
| Gene3D | G3DSA:2.40.50.140 | - | 79 | 205 | 5.7E-17 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 358 | 418 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039797612.1 | replication protein A 70 kDa DNA-binding subunit C-like [Panicum virgatum] | 0 |
| TrEMBL | A0A8T0VLX4 | Rep_fac-A_C domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_2NG196406 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology