Basic Information
Locus ID:
Chr27G002390
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 18574289 | 18575637 | - | Chr27G002390 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 96 | 185 | 1.6E-14 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 85 | 211 | 1.81E-20 | IPR008962 |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 88 | 211 | 1.7E-23 | IPR013783 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 6 | 87 | 1.4E-5 | - |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 92 | 216 | 15.827042 | IPR000535 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47180.1 | Plant VAMP (vesicle-associated membrane protein) family protein. | 0 |
| RefSeq | XP_015615809.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Oryza sativa Japonica Group] | 0 |
| Q9LVU1 | Vesicle-associated protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=PVA21 PE=1 SV=1 | 0 | |
| TrEMBL | I1R1J1 | Protein kinase domain-containing protein OS=Oryza glaberrima OX=4538 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology