Basic Information
Locus ID:
Chr27G002320
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 18412985 | 18418869 | - | Chr27G002320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 648 | 916 | 1.17389E-91 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 646 | 845 | 1.8E-44 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 34 | 395 | 1.0E-56 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 617 | 916 | 1.37E-74 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 423 | 7.3E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 182 | 1.1E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 612 | 717 | 2.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 183 | 283 | 5.4E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 718 | 932 | 3.6E-52 | - |
| SMART | SM00220 | serkin_6 | 642 | 917 | 2.1E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 642 | 917 | 38.039555 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 648 | 670 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 762 | 774 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 924 | 965 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 948 | 965 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_023157686.1 | uncharacterized protein LOC100383452 isoform X1 [Zea mays] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A804N697 | Protein kinase domain-containing protein OS=Zea mays OX=4577 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology