Basic Information
Locus ID:
Chr27G002180
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BTB/POZ domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 18047388 | 18048727 | + | Chr27G002180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 22 | 130 | 1.71901E-12 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 158 | 273 | 1.9E-24 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 142 | 273 | 1.88E-29 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 19 | 132 | 1.06E-15 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 273 | 341 | 2.9E-21 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 143 | 269 | 1.8E-33 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 21 | 132 | 1.7E-10 | IPR008974 |
| SMART | SM00225 | BTB_4 | 167 | 274 | 3.4E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 167 | 236 | 16.093641 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_025821380.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum hallii] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9W4U3 | BTB domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_08936 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_4BG0354030, gene-QOZ80_8AG0623140 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr27G002180 |