Basic Information
Locus ID:
Chr27G000210
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000027 | 845696 | 859449 | - | Chr27G000210 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 942 | 1199 | 5.35884E-114 | - |
| CDD | cd06410 | PB1_UP2 | 167 | 262 | 3.12338E-46 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 938 | 1198 | 3.9E-62 | IPR001245 |
| Pfam | PF00564 | PB1 domain | 180 | 264 | 8.7E-19 | IPR000270 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 179 | 265 | 1.45E-22 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 926 | 1196 | 3.24E-78 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 182 | 265 | 2.8E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1024 | 1212 | 1.3E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 929 | 1023 | 7.1E-26 | - |
| SMART | SM00666 | PB1_new | 178 | 265 | 1.2E-31 | IPR000270 |
| SMART | SM00220 | serkin_6 | 936 | 1205 | 2.9E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 936 | 1202 | 42.053608 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 942 | 967 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1061 | 1073 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1126 | 1148 | 7.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1170 | 1192 | 7.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1018 | 1031 | 7.4E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1055 | 1073 | 7.4E-15 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 26 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 517 | 536 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 91 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 12 | 26 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021304085.1 | uncharacterized protein LOC8075992 isoform X2 [Sorghum bicolor] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VUC4 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_12921 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology