Basic Information
Locus ID:
Chr26G015990
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 36446625 | 36449787 | + | Chr26G015990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 34 | 158 | 8.75579E-27 | IPR002083 |
| Pfam | PF00917 | MATH domain | 40 | 157 | 8.4E-8 | IPR002083 |
| Pfam | PF00651 | BTB/POZ domain | 190 | 292 | 9.9E-24 | IPR000210 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 31 | 167 | 1.8E-30 | - |
| SUPERFAMILY | SSF54695 | POZ domain | 171 | 292 | 6.67E-29 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 161 | 7.0E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 162 | 315 | 8.5E-43 | IPR011333 |
| SMART | SM00061 | math_3 | 37 | 140 | 9.4E-8 | IPR002083 |
| SMART | SM00225 | BTB_4 | 192 | 294 | 1.6E-22 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 192 | 259 | 17.706837 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 32 | 157 | 19.828413 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.5 | - | 0 |
| RefSeq | XP_004978248.1 | BTB/POZ and MATH domain-containing protein 2 [Setaria italica] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | K3YEP0 | Speckle-type POZ protein-like protein OS=Setaria italica OX=4555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology