Basic Information
Locus ID:
Chr26G013520
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Voltage-dependent anion channel
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 33884656 | 33886603 | + | Chr26G013520 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09323 | TDT_SLAC1_like | 196 | 490 | 1.38625E-101 | - |
| Pfam | PF03595 | Voltage-dependent anion channel | 197 | 501 | 6.8E-45 | IPR004695 |
| Gene3D | G3DSA:1.50.10.150 | - | 193 | 511 | 2.7E-66 | IPR038665 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 548 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
Gene Ontology
Biological Process:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12480.1 | C4-dicarboxylate transporter/malic acid transport protein. Encodes a membrane protein with 10 predicted transmembrane helices. SLAC1 is a multispanning membrane protein expressed predominantly in guard cells that plays a role in regulating cellular ion homeostasis and S-type anion currents. SLAC1 is important for normal stomatal closure in response to a variety of signals including elevated CO2, ozone, ABA, darkness, and humidity. SLAC1:GFP localizes to the plasma membrane. | 0 |
| RefSeq | XP_002446969.1 | guard cell S-type anion channel SLAC1 [Sorghum bicolor] | 0 |
| Q9LD83 | Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana OX=3702 GN=SLAC1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1E5V854 | Guard cell S-type anion channel SLAC1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017678 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology