Basic Information
Locus ID:
Chr26G010260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 30003475 | 30020223 | - | Chr26G010260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 563 | 606 | 1.65E-5 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 43 | 239 | 2.35E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 559 | 612 | 4.8E-9 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 634 | 648 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 619 | 789 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 477 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 778 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 296 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 701 | 723 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 327 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 380 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_034602583.1 | uncharacterized protein LOC117863099 [Setaria viridis] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A811QVX8 | Sister chromatid cohesion protein PDS5 B-B OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS43809 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology