Basic Information
Locus ID:
Chr26G009180
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 28561220 | 28565658 | - | Chr26G009180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 63 | 205 | 5.9E-21 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 48 | 224 | 8.63E-35 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 71 | 228 | 2.5E-27 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 62 | 224 | 29.967106 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 343 | 391 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_034602749.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X1 [Setaria viridis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TWB8 | NAC domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_39115 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology