Basic Information
Locus ID:
Chr26G006950
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 26104590 | 26107297 | - | Chr26G006950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 483 | 782 | 1.39248E-84 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 480 | 778 | 1.5E-39 | IPR001245 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 125 | 349 | 9.68E-12 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 454 | 780 | 3.24E-68 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 573 | 797 | 1.3E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 453 | 572 | 3.0E-27 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 90 | 339 | 2.6E-8 | IPR009091 |
| SMART | SM00220 | serkin_6 | 477 | 785 | 1.6E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 477 | 784 | 36.68269 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 483 | 505 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 621 | 633 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 423 | 445 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | NP_001169098.2 | Serine/threonine-protein kinase-like protein CCR4 precursor [Zea mays] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6EA41 | Serine/threonine-protein kinase-like protein CCR4 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d003614 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology