Basic Information
Locus ID:
Chr26G003080
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the copper topaquinone oxidase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 13892329 | 13897070 | + | Chr26G003080 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02727 | Copper amine oxidase, N2 domain | 79 | 156 | 1.1E-17 | IPR015800 |
| Pfam | PF01179 | Copper amine oxidase, enzyme domain | 305 | 718 | 3.3E-132 | IPR015798 |
| Pfam | PF02728 | Copper amine oxidase, N3 domain | 174 | 273 | 2.7E-24 | IPR015802 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 77 | 159 | 5.72E-18 | IPR016182 |
| SUPERFAMILY | SSF54416 | Amine oxidase N-terminal region | 172 | 281 | 7.06E-34 | IPR016182 |
| SUPERFAMILY | SSF49998 | Amine oxidase catalytic domain | 303 | 726 | 2.35E-146 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 175 | 268 | 1.9E-29 | - |
| Gene3D | G3DSA:2.70.98.20 | Copper amine oxidase, catalytic domain | 312 | 728 | 2.8E-155 | IPR036460 |
| Gene3D | G3DSA:3.10.450.40 | - | 61 | 174 | 1.2E-18 | - |
| ProSitePatterns | PS01165 | Copper amine oxidase copper-binding site signature. | 681 | 694 | - | IPR000269 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00260 (Glycine, serine and threonine metabolism)
map00260 (Glycine, serine and threonine metabolism)
ko00350 (Tyrosine metabolism)
map00350 (Tyrosine metabolism)
ko00360 (Phenylalanine metabolism)
map00360 (Phenylalanine metabolism)
ko00410 (beta-Alanine metabolism)
map00410 (beta-Alanine metabolism)
ko00950 (Isoquinoline alkaloid biosynthesis)
map00950 (Isoquinoline alkaloid biosynthesis)
ko00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
map00960 (Tropane, piperidine and pyridine alkaloid biosynthesis)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
Reaction:
R02382 (Tyramine + H2O + Oxygen <=> 4-Hydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R02529 (Aminoacetone + H2O + Oxygen <=> Methylglyoxal + Ammonia + Hydrogen peroxide)
R02613 (Phenethylamine + Oxygen + H2O <=> Phenylacetaldehyde + Ammonia + Hydrogen peroxide)
R03139 (1,3-Diaminopropane + Oxygen + H2O <=> 3-Aminopropanal + Ammonia + Hydrogen peroxide)
R04027 (N-Methylputrescine + Oxygen + H+ <=> 1-Methylpyrrolinium + Hydrogen peroxide + Ammonia)
R04300 (Dopamine + H2O + Oxygen <=> 3,4-Dihydroxyphenylacetaldehyde + Ammonia + Hydrogen peroxide)
R06154 (Methylamine + Oxygen + H2O <=> Formaldehyde + Ammonia + Hydrogen peroxide)
R06740 (Cadaverine + H2O + Oxygen <=> 5-Aminopentanal + Ammonia + Hydrogen peroxide)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12290.1 | Copper amine oxidase family protein. | 0 |
| RefSeq | XP_039838916.1 | primary amine oxidase-like [Panicum virgatum] | 0 |
| Q9M2B9 | Amine oxidase [copper-containing] gamma 2 OS=Arabidopsis thaliana OX=3702 GN=CuAOgamma2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0V2I2 | Amine oxidase OS=Panicum virgatum OX=38727 GN=PVAP13_3KG247300 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology