Basic Information
Locus ID:
Chr26G000630
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000026 | 1963697 | 1980422 | - | Chr26G000630 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 635 | 901 | 1.21834E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 47 | 83 | 1.0E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 165 | 225 | 9.4E-7 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 634 | 898 | 1.3E-45 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 285 | 344 | 9.8E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 57 | 403 | 1.38E-50 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 615 | 914 | 1.94E-77 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 46 | 198 | 1.9E-35 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 307 | 4.0E-27 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 308 | 427 | 4.4E-11 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 705 | 918 | 9.1E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 591 | 704 | 5.6E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 284 | 308 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 140 | 164 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 331 | 355 | 0.34 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 235 | 40.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 236 | 260 | 210.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 629 | 901 | 3.1E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 629 | 901 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 749 | 761 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 635 | 657 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 911 | 933 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025824162.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2T8IAK5 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G002800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology