Basic Information
Locus ID:
Chr25G015270
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 33771854 | 33776830 | + | Chr25G015270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 316 | 350 | 1.90884E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 91 | 3.3E-9 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 437 | 696 | 5.4E-40 | IPR000719 |
| SUPERFAMILY | SSF57184 | Growth factor receptor domain | 277 | 358 | 3.61E-7 | IPR009030 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 428 | 705 | 2.16E-60 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 404 | 507 | 6.4E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 509 | 712 | 2.6E-42 | - |
| Gene3D | G3DSA:2.90.20.10 | Plasmodium vivax P25 domain | 256 | 362 | 4.6E-9 | - |
| SMART | SM00179 | egfca_6 | 316 | 357 | 1.5E-5 | IPR001881 |
| SMART | SM00181 | egf_5 | 319 | 357 | 0.2 | IPR000742 |
| SMART | SM00220 | serkin_6 | 432 | 703 | 9.3E-21 | IPR000719 |
| SMART | SM00181 | egf_5 | 266 | 315 | 18.0 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 432 | 703 | 31.679253 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 556 | 568 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 438 | 460 | - | IPR017441 |
| Coils | Coil | Coil | 390 | 413 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_004962643.1 | wall-associated receptor kinase 2-like isoform X1 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WXZ4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03064 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology