Basic Information
Locus ID:
Chr25G015260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 33744926 | 33750613 | + | Chr25G015260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 286 | 320 | 4.01936E-6 | - |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 91 | 3.0E-9 | IPR025287 |
| Pfam | PF00069 | Protein kinase domain | 400 | 641 | 2.3E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 396 | 650 | 9.14E-49 | IPR011009 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 285 | 326 | 1.93E-5 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 366 | 470 | 3.7E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 472 | 657 | 1.4E-27 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 236 | 323 | 5.6E-9 | - |
| SMART | SM00181 | egf_5 | 289 | 327 | 0.2 | IPR000742 |
| SMART | SM00181 | egf_5 | 236 | 285 | 18.0 | IPR000742 |
| SMART | SM00179 | egfca_6 | 286 | 327 | 1.5E-5 | IPR001881 |
| SMART | SM00220 | serkin_6 | 395 | 648 | 3.4E-11 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 395 | 648 | 21.799587 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 401 | 423 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21270.1 | wall-associated kinase 2. cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase. | 0 |
| RefSeq | XP_004962643.1 | wall-associated receptor kinase 2-like isoform X1 [Setaria italica] | 0 |
| Q9LMP1 | Wall-associated receptor kinase 2 OS=Arabidopsis thaliana OX=3702 GN=WAK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9WXZ4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03064 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology