Basic Information
Locus ID:
Chr25G015250
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 33726267 | 33732014 | + | Chr25G015250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00054 | EGF_CA | 286 | 320 | 1.17399E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 407 | 655 | 1.1E-30 | IPR000719 |
| Pfam | PF13947 | Wall-associated receptor kinase galacturonan-binding | 33 | 91 | 1.6E-9 | IPR025287 |
| SUPERFAMILY | SSF57196 | EGF/Laminin | 286 | 326 | 3.02E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 397 | 664 | 2.35E-51 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 374 | 477 | 2.6E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 671 | 1.6E-31 | - |
| Gene3D | G3DSA:2.10.25.10 | Laminin | 236 | 327 | 4.1E-8 | - |
| SMART | SM00179 | egfca_6 | 286 | 327 | 8.8E-5 | IPR001881 |
| SMART | SM00220 | serkin_6 | 402 | 662 | 3.7E-12 | IPR000719 |
| SMART | SM00181 | egf_5 | 236 | 285 | 18.0 | IPR000742 |
| SMART | SM00181 | egf_5 | 289 | 327 | 0.2 | IPR000742 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 402 | 662 | 24.371975 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 526 | 538 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 408 | 430 | - | IPR017441 |
| Coils | Coil | Coil | 360 | 383 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21230.1 | wall associated kinase 5. encodes a wall-associated kinase | 0 |
| RefSeq | XP_004962643.1 | wall-associated receptor kinase 2-like isoform X1 [Setaria italica] | 0 |
| Q9LMN7 | Wall-associated receptor kinase 5 OS=Arabidopsis thaliana OX=3702 GN=WAK5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9WXZ4 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_03064 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology