Basic Information
Locus ID:
Chr25G009100
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 8987930 | 8990797 | - | Chr25G009100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 51 | 192 | 5.3E-19 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 38 | 207 | 3.27E-33 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 59 | 216 | 1.3E-26 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 50 | 211 | 29.516993 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 233 | 256 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_034602750.1 | SUPPRESSOR OF GAMMA RESPONSE 1-like isoform X2 [Setaria viridis] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9TXN5 | NAC domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_39118 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology