Basic Information
Locus ID:
Chr25G007230
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 6957770 | 6960424 | - | Chr25G007230 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 473 | 774 | 2.79177E-86 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 470 | 772 | 5.6E-40 | IPR001245 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 127 | 359 | 7.46E-11 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 447 | 773 | 5.26E-71 | IPR011009 |
| Gene3D | G3DSA:2.130.10.30 | - | 86 | 362 | 2.8E-11 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 564 | 790 | 1.5E-51 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 444 | 563 | 3.2E-29 | - |
| SMART | SM00220 | serkin_6 | 467 | 777 | 5.6E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 467 | 776 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 613 | 625 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 473 | 495 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 435 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_025825028.1 | serine/threonine-protein kinase-like protein CCR4 [Panicum hallii] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2T7CV72 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_7G148400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology