Basic Information
Locus ID:
Chr25G003130
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 2572012 | 2577946 | + | Chr25G003130 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 693 | 955 | 1.00811E-98 | - |
| Pfam | PF11721 | Malectin domain | 421 | 606 | 2.9E-42 | IPR021720 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 691 | 955 | 5.6E-48 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 666 | 955 | 4.78E-81 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 88 | 390 | 8.67E-50 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 763 | 972 | 3.9E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 47 | 204 | 3.2E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 205 | 305 | 2.3E-21 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 419 | 6.5E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 661 | 762 | 5.0E-38 | - |
| Gene3D | G3DSA:2.60.120.430 | - | 420 | 609 | 1.6E-31 | - |
| SMART | SM00220 | serkin_6 | 687 | 955 | 3.5E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 687 | 961 | 38.195026 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 693 | 715 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 807 | 819 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 981 | 1000 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 981 | 1018 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_025826032.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56130 [Panicum hallii] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8T0QD89 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_7NG400900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology