Basic Information
Locus ID:
Chr25G002990
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
FLS2
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 2453291 | 2456949 | + | Chr25G002990 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 49 | 94 | 7.7E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 895 | 1181 | 1.3E-37 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 774 | 791 | 0.82 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 578 | 638 | 1.9E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 361 | 421 | 1.6E-7 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 872 | 1183 | 1.26E-64 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 473 | 805 | 1.22E-64 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 101 | 422 | 4.39E-64 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 551 | 821 | 1.6E-79 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 866 | 975 | 3.0E-21 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 480 | 550 | 1.4E-16 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 306 | 404 | 4.0E-30 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 976 | 1192 | 3.1E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 210 | 305 | 1.5E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 405 | 479 | 1.0E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 48 | 209 | 9.2E-44 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 168 | 192 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 554 | 577 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 772 | 797 | 1.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 120 | 144 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 312 | 336 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 264 | 288 | 70.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 360 | 383 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 650 | 675 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 699 | 723 | 89.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 895 | 1184 | 1.3E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 625 | 648 | 190.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 601 | 624 | 44.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 384 | 408 | 66.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 748 | 771 | 110.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 504 | 527 | 73.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 895 | 1184 | 34.732197 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1022 | 1034 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 772 | 785 | 9.5E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 628 | 641 | 9.5E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G46330.1 | Leucine-rich receptor-like protein kinase family protein. Encodes a leucine-rich repeat serine/threonine protein kinase that is expressed ubiquitously. FLS2 is involved in MAP kinase signalling relay involved in innate immunity. Essential in the perception of flagellin, a potent elicitor of the defense response. FLS2 is directed for degradation by the bacterial ubiquitin ligase AvrPtoB. | 0 |
| RefSeq | XP_025822857.1 | LRR receptor-like serine/threonine-protein kinase FLS2 [Panicum hallii] | 0 |
| Q0JA29 | LRR receptor-like serine/threonine-protein kinase FLS2 OS=Oryza sativa subsp. japonica OX=39947 GN=FLS2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0A9C6B8 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_545 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah016577, Ah016595 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00022985 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl45319, Sgl50103 |
| Amaranthaceae | Chenopodium album | 5 | gene:ENSEOMG00000011016, gene:ENSEOMG00000033233 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.8AG0008760, CQ.Regalona.r1.8BG0009090 ... |
| Anacardiaceae | Pistacia vera | 2 | pistato.v30063970, pistato.v30070100 |
| Apiaceae | Apium graveolens | 4 | Ag6G01110, Ag6G01111, Ag7G00866, Ag7G00867 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G018210 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103697992 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_04.2277.V1.1, AsparagusV1_06.35.V1.1 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G46330.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10000746m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp2g11180.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB04g011060.2N, BniB04g015820.2N |
| Casuarinaceae | Casuarina equisetifolia | 2 | Ceq04G0359, Ceq04G0360 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl04G0467 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno17g04100 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g00180 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG12.671 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb2G14589 |
| Poaceae | Echinochloa crus-galli | 2 | BH09.2514, CH09.2744 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_4AG0303720, gene-QOZ80_4BG0334630 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0195450.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_047795 |
| Poaceae | Oryza coarctata | 2 | Oco07G016100, Oco08G015590 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g52780.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_06G231100 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0105934, Pt_Chr0301209 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr25G002990, Chr30G002950 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G781400 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC2AG065670, gene_TRIDC2BG070540 |
| Poaceae | Triticum aestivum | 3 | TraesCS2A02G461800.1, TraesCS2B02G483400.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb070510_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g21974 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG03.63 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc10g05640 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_14_RagTag.873 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-16634 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5470 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000025l.79 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-8687 |
| Salicaceae | Populus euphratica | 1 | populus_peu09863 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132622079 |
| Solanaceae | Solanum chilense | 2 | SOLCI001783100, SOLCI001783300 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107008930, gene-LOC107010815 |