Basic Information
Locus ID:
Chr25G000090
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein-only RNase P
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000025 | 138478 | 151870 | - | Chr25G000090 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 63 | 273 | 1.0E-77 | IPR033443 |
| Pfam | PF16953 | Protein-only RNase P | 289 | 514 | 1.0E-69 | IPR031595 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 70 | 310 | 8.0E-53 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 311 | 476 | 1.3E-61 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 51 | 75 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 75 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_021318717.1 | proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Sorghum bicolor] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | K3Z522 | ribonuclease P OS=Setaria italica OX=4555 GN=101781689 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology