Basic Information
Locus ID:
Chr24G015180
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000024 | 39941156 | 39945741 | - | Chr24G015180 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 419 | 555 | 1.6E-19 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 115 | 151 | 8.1E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 156 | 198 | 2.6E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 66 | 1.7E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 25 | 246 | 4.67E-41 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 396 | 554 | 8.86E-38 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 378 | 493 | 1.4E-22 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 255 | 4.0E-48 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 494 | 566 | 1.7E-16 | - |
| SMART | SM00369 | LRR_typ_2 | 91 | 120 | 36.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 138 | 160 | 1.3 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 161 | 184 | 400.0 | IPR003591 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 140 | 161 | 7.858268 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 416 | 578 | 21.757185 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 187 | 209 | 7.242212 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 422 | 445 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 269 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 244 | 285 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G53730.1 | STRUBBELIG-receptor family 6. | 0 |
| RefSeq | XP_025800533.1 | protein STRUBBELIG-RECEPTOR FAMILY 7-like isoform X1 [Panicum hallii] | 0 |
| Q9C8M9 | Protein STRUBBELIG-RECEPTOR FAMILY 6 OS=Arabidopsis thaliana OX=3702 GN=SRF6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VQQ7 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_11254 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology