Basic Information
Locus ID:
Chr24G011750
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the ubiquitin-activating E1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000024 | 36073590 | 36079874 | - | Chr24G011750 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01491 | Ube1_repeat1 | 52 | 414 | 1.18054E-135 | - |
| Pfam | PF09358 | Ubiquitin fold domain | 960 | 1043 | 1.9E-17 | IPR018965 |
| Pfam | PF00899 | ThiF family | 427 | 482 | 1.0E-13 | IPR000594 |
| Pfam | PF00899 | ThiF family | 544 | 960 | 1.5E-43 | IPR000594 |
| Pfam | PF10585 | Ubiquitin-activating enzyme active site | 667 | 901 | 8.5E-68 | IPR019572 |
| Pfam | PF00899 | ThiF family | 54 | 153 | 2.1E-20 | IPR000594 |
| Pfam | PF16191 | Ubiquitin-activating enzyme E1 four-helix bundle | 276 | 345 | 5.7E-20 | IPR032420 |
| Pfam | PF16190 | Ubiquitin-activating enzyme E1 FCCH domain | 204 | 274 | 2.6E-26 | IPR032418 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 544 | 956 | 4.05E-77 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 47 | 412 | 1.03E-85 | IPR035985 |
| SUPERFAMILY | SSF69572 | Activating enzymes of the ubiquitin-like proteins | 422 | 483 | 1.83E-21 | IPR035985 |
| Gene3D | G3DSA:3.10.290.60 | - | 957 | 1046 | 1.6E-18 | IPR038252 |
| Gene3D | G3DSA:3.40.50.720 | - | 44 | 156 | 8.7E-36 | - |
| Gene3D | G3DSA:1.10.10.2660 | - | 659 | 908 | 9.4E-73 | IPR042063 |
| Gene3D | G3DSA:2.40.30.180 | - | 192 | 273 | 8.4E-106 | IPR042302 |
| Gene3D | G3DSA:3.40.50.12550 | - | 160 | 434 | 8.4E-106 | - |
| Gene3D | G3DSA:3.40.50.720 | - | 435 | 498 | 3.1E-11 | - |
| SMART | SM00985 | UBA_e1_C_a_2 | 939 | 1043 | 4.8E-27 | IPR018965 |
| ProSitePatterns | PS00536 | Ubiquitin-activating enzyme signature 1. | 389 | 397 | - | IPR018074 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 709 | 736 | 2.3E-23 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 58 | 82 | 2.3E-23 | IPR000011 |
| PRINTS | PR01849 | Ubiquitin-activating enzyme E1 signature | 166 | 193 | 2.3E-23 | IPR000011 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 51 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G06460.1 | ubiquitin activating enzyme 2. Encodes a ubiquitin-activating enzyme (E1), involved in the first step in conjugating multiple ubiquitins to proteins targeted for degradation. Gene is expressed in most tissues examined. | 0 |
| RefSeq | XP_025802919.1 | ubiquitin-activating enzyme E1 3 isoform X1 [Panicum hallii] | 0 |
| P31252 | Ubiquitin-activating enzyme E1 3 OS=Triticum aestivum OX=4565 GN=UBA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9SER0 | E1 ubiquitin-activating enzyme (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_56928 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology