Basic Information
Locus ID:
Chr24G009250
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000024 | 31266956 | 31270465 | - | Chr24G009250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 360 | 625 | 1.26966E-93 | - |
| Pfam | PF01657 | Salt stress response/antifungal | 37 | 126 | 3.0E-17 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 158 | 251 | 6.2E-11 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 355 | 560 | 9.7E-51 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 335 | 623 | 3.37E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 630 | 1.6E-58 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 26 | 130 | 2.7E-24 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 318 | 429 | 8.6E-34 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 147 | 254 | 3.3E-13 | IPR038408 |
| SMART | SM00220 | serkin_6 | 354 | 622 | 1.1E-36 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 144 | 255 | 13.999523 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 130 | 19.15922 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 638 | 40.399933 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 475 | 487 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 360 | 382 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_034593848.1 | cysteine-rich receptor-like protein kinase 10 [Setaria viridis] | 0 |
| Q0D5R3 | Cysteine-rich receptor-like protein kinase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6UJ36 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_5G204900v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology