Basic Information
Locus ID:
Chr24G000380
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000024 | 603524 | 607972 | - | Chr24G000380 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00160 | Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD | 13 | 173 | 5.8E-46 | IPR002130 |
| SUPERFAMILY | SSF50891 | Cyclophilin-like | 4 | 176 | 1.46E-69 | IPR029000 |
| Gene3D | G3DSA:2.40.100.10 | - | 1 | 182 | 1.2E-76 | IPR029000 |
| ProSiteProfiles | PS50072 | Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. | 10 | 174 | 42.056599 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 107 | 122 | 1.0E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 64 | 76 | 1.0E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 122 | 134 | 1.0E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 27 | 42 | 1.0E-31 | IPR002130 |
| PRINTS | PR00153 | Cyclophilin peptidyl-prolyl cis-trans isomerase signature | 135 | 150 | 1.0E-31 | IPR002130 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 611 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 431 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 263 | 299 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 596 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 349 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 524 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 350 | 376 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 210 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 565 | 580 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 183 | 631 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 320 | 334 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 228 | 257 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 462 | 478 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G63400.1 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein. | 0 |
| RefSeq | XP_002459423.1 | peptidyl-prolyl cis-trans isomerase CYP63 isoform X2 [Sorghum bicolor] | 0 |
| Q9LY75 | Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9VZF1 | PPIase cyclophilin-type domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_15387 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology