Basic Information
Locus ID:
Chr23G019310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000023 | 36994421 | 37016425 | - | Chr23G019310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 707 | 973 | 3.34815E-94 | - |
| Pfam | PF13855 | Leucine rich repeat | 237 | 297 | 8.2E-7 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 357 | 416 | 1.7E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 703 | 968 | 5.3E-46 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 119 | 155 | 1.0E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 687 | 986 | 4.24E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 128 | 472 | 1.55E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 118 | 375 | 2.0E-60 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 777 | 990 | 9.3E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 376 | 497 | 3.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 663 | 776 | 3.9E-35 | - |
| SMART | SM00369 | LRR_typ_2 | 356 | 380 | 100.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 403 | 427 | 0.34 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 212 | 236 | 210.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 284 | 308 | 18.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 701 | 973 | 2.6E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 701 | 973 | 37.841679 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 821 | 833 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 707 | 729 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 981 | 1006 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_025824162.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2T8IAK5 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_7G002800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology