halophFGD

Basic Information

Locus ID: Chr23G018590

Species & Taxonomic ID: Sporobolus alterniflorus & 29706

Genome Assembly: GWHCBIM00000000

Description: Domain of unknown function (DUF4220)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
GWHCBIM00000023	34939965	34942031	+	Chr23G018590

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
0.00	0.00 Da	0.00	0.00	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF13968	Domain of unknown function (DUF4220)	43	381	1.3E-87	IPR025315
Pfam	PF04578	Protein of unknown function, DUF594	619	667	1.9E-16	IPR007658

Best hit

Source	Best Hit ID	Description
TAIR	AT5G45540.1	Protein of unknown function (DUF594).
RefSeq	XP_037481843.1	uncharacterized protein LOC119360198 [Triticum dicoccoides]
TrEMBL	A0A5J9T6N0	DUF4220 domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_47085 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	6	jg20356, jg20357, jg20358, jg22563, jg24492, jg24493
Aizoaceae	Mesembryanthemum crystallinum	12	gene_12984, gene_16335, gene_17823, gene_17824, gene_17909 ... gene_2013, gene_20520, gene_25122, gene_25125, gene_25130, gene_25387, gene_7943
Amaranthaceae	Atriplex hortensis	11	Ah018429, Ah019058, Ah019314, Ah031851, Ah031855, Ah031861 ... Ah031863, Ah031865, Ah032867, Ah035856, Ah039528
Amaranthaceae	Beta vulgaris	4	BVRB_2g043920, BVRB_3g054700, BVRB_4g089540, BVRB_5g104580
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg18284, Sbi_jg30341, Sbi_jg36655, Sbi_jg36658
Amaranthaceae	Salicornia europaea	4	Seu_jg18140, Seu_jg18146, Seu_jg4539, Seu_jg4625
Amaranthaceae	Suaeda aralocaspica	8	GOSA_00014253, GOSA_00014558, GOSA_00017201, GOSA_00017203 ... GOSA_00017204, GOSA_00017323, GOSA_00017911, GOSA_00025610
Amaranthaceae	Suaeda glauca	18	Sgl01143, Sgl06232, Sgl12385, Sgl12386, Sgl17668, Sgl28763 ... Sgl45195, Sgl49961, Sgl65729, Sgl65740, Sgl65775, Sgl70055, Sgl70074, Sgl70078, Sgl70088, Sgl70125, Sgl78167, Sgl80658
Amaranthaceae	Chenopodium album	21	gene:ENSEOMG00000002504, gene:ENSEOMG00000003749 ... gene:ENSEOMG00000012858, gene:ENSEOMG00000014292, gene:ENSEOMG00000015661, gene:ENSEOMG00000018147, gene:ENSEOMG00000019247, gene:ENSEOMG00000028384, gene:ENSEOMG00000028942, gene:ENSEOMG00000029353, gene:ENSEOMG00000031609, gene:ENSEOMG00000033278, gene:ENSEOMG00000033511, gene:ENSEOMG00000034487, gene:ENSEOMG00000043631, gene:ENSEOMG00000046543, gene:ENSEOMG00000050204, gene:ENSEOMG00000050682, gene:ENSEOMG00000050836, gene:ENSEOMG00000051023, gene:ENSEOMG00000051465
Amaranthaceae	Chenopodium quinoa	14	CQ.Regalona.r1.1AG0023250, CQ.Regalona.r1.1AG0023260 ... CQ.Regalona.r1.2AG0001410, CQ.Regalona.r1.2AG0001430, CQ.Regalona.r1.2AG0006790, CQ.Regalona.r1.2BG0002470, CQ.Regalona.r1.2BG0002500, CQ.Regalona.r1.2BG0002560, CQ.Regalona.r1.2BG0007050, CQ.Regalona.r1.3AG0001730, CQ.Regalona.r1.3AG0009670, CQ.Regalona.r1.3BG0001790, CQ.Regalona.r1.3BG0006830, CQ.Regalona.r1.3BG0009820
Anacardiaceae	Pistacia vera	43	pistato.v30032030, pistato.v30039180, pistato.v30044140 ... pistato.v30097500, pistato.v30109040, pistato.v30116450, pistato.v30118220, pistato.v30118590, pistato.v30118620, pistato.v30118640, pistato.v30118660, pistato.v30118690, pistato.v30118700, pistato.v30118870, pistato.v30118930, pistato.v30119400, pistato.v30119410, pistato.v30124600, pistato.v30134680, pistato.v30134730, pistato.v30165950, pistato.v30167090, pistato.v30199690, pistato.v30199700, pistato.v30199710, pistato.v30199720, pistato.v30199750, pistato.v30199760, pistato.v30199820, pistato.v30199830, pistato.v30199850, pistato.v30199860, pistato.v30199890, pistato.v30199900, pistato.v30199910, pistato.v30199920, pistato.v30199940, pistato.v30237600, pistato.v30237610, pistato.v30243610, pistato.v30295600, pistato.v30296490, pistato.v30296500
Apiaceae	Apium graveolens	9	Ag11G04844, Ag11G04845, Ag11G04846, Ag11G04847, Ag5G01313 ... Ag5G02252, Ag6G00956, Ag6G02209, AgUnG01296
Arecaceae	Cocos nucifera	5	COCNU_01G014220, COCNU_02G003750, COCNU_06G010300 ... COCNU_06G010340, COCNU_16G000850
Arecaceae	Phoenix dactylifera	1	gene-LOC103724015
Asteraceae	Flaveria trinervia	6	Ftri11G29413, Ftri17G20600, Ftri17G24554, Ftri17G32640 ... Ftri8G14863, Ftri9G05736
Brassicaceae	Arabidopsis thaliana	7	AT4G19080.1, AT4G19090.1, AT5G45460.1, AT5G45470.1 ... AT5G45480.1, AT5G45530.1, AT5G45540.1
Brassicaceae	Eutrema salsugineum	8	Thhalv10000764m.g.v1.0, Thhalv10000775m.g.v1.0 ... Thhalv10000780m.g.v1.0, Thhalv10001177m.g.v1.0, Thhalv10001204m.g.v1.0, Thhalv10001216m.g.v1.0, Thhalv10024439m.g.v1.0, Thhalv10025163m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp2g10430.v2.2, Sp2g10440.v2.2
Brassicaceae	Brassica nigra	9	BniB02g062490.2N, BniB03g006850.2N, BniB03g006860.2N ... BniB04g011590.2N, BniB04g011600.2N, BniB05g017300.2N, BniB05g017340.2N, BniB07g023960.2N, BniB07g023970.2N
Casuarinaceae	Casuarina equisetifolia	11	Ceq01G0197, Ceq01G2445, Ceq02G2259, Ceq03G2638, Ceq03G2639 ... Ceq03G2640, Ceq04G1489, Ceq07G1844, Ceq07G2169, Ceq08G2364, Ceq08G2371
Casuarinaceae	Casuarina glauca	15	Cgl01G0217, Cgl01G0219, Cgl01G0392, Cgl01G2204, Cgl01G2228 ... Cgl01G2592, Cgl01G2593, Cgl01G2706, Cgl02G1622, Cgl04G1657, Cgl04G1659, Cgl04G2778, Cgl07G2006, Cgl08G2562, Cgl08G2563
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-682
Nitrariaceae	Nitraria sibirica	14	evm.TU.LG01.102, evm.TU.LG01.104, evm.TU.LG01.109 ... evm.TU.LG01.111, evm.TU.LG01.114, evm.TU.LG01.115, evm.TU.LG01.116, evm.TU.LG01.140, evm.TU.LG01.143, evm.TU.LG01.144, evm.TU.LG01.185, evm.TU.LG01.52, evm.TU.LG01.53, evm.TU.LG12.290
Plumbaginaceae	Limonium bicolor	8	Lb0G38325, Lb1G01899, Lb1G01900, Lb2G14632, Lb3G15757 ... Lb4G24734, Lb4G24755, Lb4G24774
Poaceae	Echinochloa crus-galli	23	AH02.3566, AH04.2062, AH04.2323, AH09.168, AH09.25, AH09.709 ... BH01.3664, BH03.1734, BH04.1456, BH06.2687, BH09.192, BH09.241, BH09.262, BH09.99, CH02.2918, CH03.38, CH03.39, CH08.57, CH08.719, CH09.221, CH09.236, CH09.67, CH09.782
Poaceae	Eleusine coracana subsp. coracana	19	gene-QOZ80_1AG0036610, gene-QOZ80_1BG0086610 ... gene-QOZ80_4AG0326710, gene-QOZ80_4AG0326720, gene-QOZ80_4AG0326940, gene-QOZ80_4AG0328370, gene-QOZ80_4BG0358740, gene-QOZ80_4BG0358750, gene-QOZ80_4BG0358980, gene-QOZ80_4BG0360460, gene-QOZ80_5BG0444090, gene-QOZ80_7AG0552390, gene-QOZ80_7AG0554470, gene-QOZ80_7BG0583430, gene-QOZ80_7BG0585540, gene-QOZ80_7BG0585590, gene-QOZ80_9AG0690750, gene-QOZ80_9BG0717000, gene-QOZ80_9BG0717060
Poaceae	Hordeum vulgare	15	HORVU.MOREX.r3.1HG0063210.1.CDS1 ... HORVU.MOREX.r3.1HG0092370.1.CDS1, HORVU.MOREX.r3.2HG0097980.1.CDS1, HORVU.MOREX.r3.2HG0098070.1.CDS1, HORVU.MOREX.r3.2HG0098090.1.CDS1, HORVU.MOREX.r3.2HG0098100.1.CDS1, HORVU.MOREX.r3.2HG0098120.1.CDS1, HORVU.MOREX.r3.2HG0100480.1.CDS1, HORVU.MOREX.r3.2HG0100490.1.CDS1, HORVU.MOREX.r3.2HG0157320.1.CDS1, HORVU.MOREX.r3.2HG0207890.1.CDS1, HORVU.MOREX.r3.2HG0217020.1, HORVU.MOREX.r3.3HG0222310.1.CDS1, HORVU.MOREX.r3.5HG0503530.1.CDS1, HORVU.MOREX.r3.6HG0630900.1
Poaceae	Lolium multiflorum	24	gene-QYE76_003837, gene-QYE76_003991, gene-QYE76_008049 ... gene-QYE76_013466, gene-QYE76_020793, gene-QYE76_023036, gene-QYE76_025390, gene-QYE76_029451, gene-QYE76_034282, gene-QYE76_034360, gene-QYE76_035289, gene-QYE76_035433, gene-QYE76_037982, gene-QYE76_037986, gene-QYE76_038086, gene-QYE76_038087, gene-QYE76_043063, gene-QYE76_046785, gene-QYE76_055968, gene-QYE76_055973, gene-QYE76_056100, gene-QYE76_061183, gene-QYE76_069093, gene-QYE76_071728
Poaceae	Oryza coarctata	19	Oco01G022370, Oco01G030120, Oco02G023030, Oco02G031280 ... Oco07G000460, Oco07G001360, Oco08G000780, Oco08G000880, Oco08G000900, Oco08G000980, Oco11G016540, Oco13G000220, Oco13G000400, Oco14G000220, Oco14G008970, Oco16G001850, Oco19G002620, Oco20G002770, Oco23G005790
Poaceae	Oryza sativa	19	LOC_Os01g58500.1, LOC_Os01g72380.1, LOC_Os04g05090.1 ... LOC_Os04g06840.1, LOC_Os04g06900.1, LOC_Os04g06910.1, LOC_Os04g06990.1, LOC_Os04g07040.1, LOC_Os04g07250.1, LOC_Os04g12110.1, LOC_Os06g49000.1, LOC_Os07g01520.1, LOC_Os07g01840.1, LOC_Os09g17980.1, LOC_Os10g11310.2, LOC_Os10g20770.1, LOC_Os11g42030.1, LOC_Os11g42080.1, LOC_Os12g21940.1
Poaceae	Paspalum vaginatum	9	gene-BS78_01G311800, gene-BS78_02G002900, gene-BS78_K166300 ... gene-BS78_06G003500, gene-BS78_06G024600, gene-BS78_07G024000, gene-BS78_09G044200, gene-BS78_09G056200, gene-BS78_10G188600
Poaceae	Puccinellia tenuiflora	14	Pt_Chr0100376, Pt_Chr0205804, Pt_Chr0207598, Pt_Chr0303292 ... Pt_Chr0305926, Pt_Chr0305985, Pt_Chr0404808, Pt_Chr0404809, Pt_Chr0405864, Pt_Chr0405927, Pt_Chr0500164, Pt_Chr0503317, Pt_Chr0601717, Pt_Chr0700360
Poaceae	Sporobolus alterniflorus	24	Chr02G007270, Chr02G007290, Chr16G014090, Chr17G003990 ... Chr17G013520, Chr20G005360, Chr23G018220, Chr23G018580, Chr23G018590, Chr23G019230, Chr24G002680, Chr25G015420, Chr25G015600, Chr25G015950, Chr25G016590, Chr25G016850, Chr25G016860, Chr26G000730, Chr26G001140, Chr26G001150, Chr28G000220, Chr30G014520, Chr30G015320, Chr30G015330
Poaceae	Thinopyrum elongatum	27	Tel1E01G012200, Tel1E01G012300, Tel1E01G056400 ... Tel1E01G056500, Tel1E01G418300, Tel2E01G039700, Tel2E01G061300, Tel2E01G061800, Tel2E01G063800, Tel2E01G064200, Tel2E01G097600, Tel2E01G098400, Tel2E01G099000, Tel2E01G1015400, Tel2E01G1015600, Tel2E01G1045800, Tel2E01G169200, Tel2E01G481400, Tel2E01G773900, Tel3E01G006600, Tel5E01G433000, Tel5E01G509200, Tel6E01G074400, Tel6E01G698200, Tel7E01G012600, Tel7E01G360700, Tel7E01G944700
Poaceae	Triticum dicoccoides	11	gene_TRIDC1BG042920, gene_TRIDC2AG004110 ... gene_TRIDC2AG004130, gene_TRIDC2AG036640, gene_TRIDC2BG004780, gene_TRIDC2BG004800, gene_TRIDC2BG041290, gene_TRIDC3AG047270, gene_TRIDC3BG005920, gene_TRIDC3BG053600, gene_TRIDC7AG024690
Poaceae	Triticum aestivum	63	TraesCS1B02G262500.1.cds1, TraesCS1D02G251400.1.cds1 ... TraesCS2A02G020500.1, TraesCS2A02G020600.1.cds1, TraesCS2A02G021100.1.cds1, TraesCS2A02G021300.1, TraesCS2A02G021600.1.cds1, TraesCS2A02G038800.1.cds1, TraesCS2A02G051900.1, TraesCS2A02G086700.1, TraesCS2A02G258700.1.cds1, TraesCS2B02G029400.1.cds1, TraesCS2B02G029500.1.cds1, TraesCS2B02G029700.1.cds1, TraesCS2B02G029900.1.cds1, TraesCS2B02G052200.1.cds1, TraesCS2B02G064900.1, TraesCS2B02G117600.1.cds1, TraesCS2B02G140700.1, TraesCS2B02G140800.1, TraesCS2B02G165200.1.cds1, TraesCS2B02G284600.1.cds1, TraesCS2B02G384200.1.cds1, TraesCS2B02G622900.1.cds1, TraesCS2D02G021800.1, TraesCS2D02G022000.1.cds1, TraesCS2D02G022200.1.cds1, TraesCS2D02G037800.1.cds1, TraesCS2D02G037900.1.cds1, TraesCS2D02G051200.1.cds1, TraesCS2D02G051600.1, TraesCS2D02G084000.1, TraesCS2D02G121800.1, TraesCS2D02G264800.1.cds1, TraesCS3A02G328600.1, TraesCS3A02G525900.1.cds1, TraesCS3B02G004900.1.cds1, TraesCS3B02G358700.1, TraesCS3D02G008200.1.cds1, TraesCS3D02G322200.1, TraesCS3D02G531100.1, TraesCS5A02G270600.1.cds1, TraesCS5B02G005500.1.cds1, TraesCS5B02G005600.1.cds1, TraesCS5B02G271100.1.cds1, TraesCS5D02G278400.1, TraesCS5D02G326400.1.cds1, TraesCS6A02G387100.1.cds1, TraesCS6B02G002000.1.cds1, TraesCS6B02G106000.1, TraesCS6B02G406600.1, TraesCS6B02G426800.1.cds1, TraesCS6B02G426900.1.cds1, TraesCS6D02G353000.1, TraesCS7A02G197200.1, TraesCS7B02G340000.1.cds1, TraesCS7B02G447500.1.cds1, TraesCS7D02G198600.1.cds1, TraesCS7D02G552100.1, TraesCSU02G001900.1, TraesCSU02G112300.1.cds1, TraesCSU02G123500.1, TraesCSU02G154800.1
Poaceae	Zea mays	9	Zm00001eb088590_P001, Zm00001eb088610_P001 ... Zm00001eb089630_P003, Zm00001eb118320_P001, Zm00001eb150790_P001, Zm00001eb179430_P001, Zm00001eb337820_P001, Zm00001eb418250_P001, Zm00001eb418950_P005
Poaceae	Zoysia japonica	12	nbis-gene-29597, nbis-gene-32112, nbis-gene-37367 ... nbis-gene-37370, nbis-gene-37373, nbis-gene-37565, nbis-gene-39024, nbis-gene-43144, nbis-gene-49009, nbis-gene-52547, nbis-gene-53663, nbis-gene-53919
Poaceae	Zoysia macrostachya	7	Zma_g18194, Zma_g19240, Zma_g20775, Zma_g20869, Zma_g20872 ... Zma_g20950, Zma_g5858
Portulacaceae	Portulaca oleracea	3	evm.TU.LG10.884, evm.TU.LG10.931, evm.TU.LG17.927
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_14_RagTag.745, evm.TU.Scaffold_14_RagTag.747 ... evm.TU.Scaffold_14_RagTag.919, evm.TU.Scaffold_18_RagTag.787
Rhizophoraceae	Carallia pectinifolia	8	nbisL1-mrna-17703, nbisL1-mrna-27530, nbisL1-mrna-29556 ... nbisL1-mrna-29588, nbisL1-mrna-29595, nbisL1-mrna-29842, nbisL1-mrna-29855, nbisL1-mrna-29877
Rhizophoraceae	Ceriops tagal	1	nbisL1-mrna-17099
Rhizophoraceae	Ceriops zippeliana	1	nbisL1-mrna-17087
Rhizophoraceae	Kandelia candel	4	add.evm.TU.utg000007l.13, add.evm.TU.utg000007l.14 ... add.evm.TU.utg000007l.15, add.evm.TU.utg000007l.17
Rhizophoraceae	Kandelia obovata	3	Maker00015991, Maker00015993, Maker00016001
Rhizophoraceae	Rhizophora apiculata	2	nbisL1-mrna-19744, nbisL1-mrna-7472
Rhizophoraceae	Rhizophora mangle	1	nbisL1-mrna-22836
Salicaceae	Populus euphratica	37	populus_peu03125, populus_peu10568, populus_peu10569 ... populus_peu10570, populus_peu10579, populus_peu10580, populus_peu10581, populus_peu10582, populus_peu10583, populus_peu10584, populus_peu10586, populus_peu10587, populus_peu10641, populus_peu10642, populus_peu10643, populus_peu10644, populus_peu10646, populus_peu10647, populus_peu10649, populus_peu18500, populus_peu22657, populus_peu23572, populus_peu26485, populus_peu26486, populus_peu28480, populus_peu28481, populus_peu28970, populus_peu28971, populus_peu28972, populus_peu28973, populus_peu29040, populus_peu29043, populus_peu29044, populus_peu29045, populus_peu33770, populus_peu33771, populus_peu33988
Solanaceae	Lycium barbarum	3	gene-LOC132604191, gene-LOC132621077, gene-LOC132624448
Solanaceae	Solanum chilense	2	SOLCI002595800, SOLCI005852800
Solanaceae	Solanum pennellii	2	gene-LOC107007122, gene-LOC107011113
Tamaricaceae	Reaumuria soongarica	26	MSTRG.16658_chr09_+, MSTRG.17865_chr09_-, MSTRG.7114_chr04_+ ... MSTRG.18677_chr10_-, MSTRG.18678_chr10_+, MSTRG.20866_chr11_-, STRG.28116_chr04_+, STRG.28118_chr04_+, STRG.30074_chr10_+, STRG.32211_chr09_+, STRG.32223_chr09_-, STRG.32224_chr09_+, STRG.32225_chr09_-, STRG.32227_chr09_+, STRG.4445_chr03_-, gene_12866, gene_12867, gene_12869, gene_17011, gene_17035, gene_17036, gene_17952, gene_17974, gene_17975, gene_18014, gene_8253
Tamaricaceae	Tamarix chinensis	10	TC04G0361, TC05G1932, TC06G0735, TC06G0741, TC06G0748 ... TC06G0749, TC06G0802, TC06G0862, TC06G0864, TC06G0892