Basic Information
Locus ID:
Chr23G012570
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000023 | 11658385 | 11661040 | + | Chr23G012570 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 483 | 782 | 1.4E-40 | IPR001245 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 125 | 315 | 1.44E-10 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 457 | 783 | 2.29E-68 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 457 | 575 | 2.8E-27 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 91 | 340 | 3.5E-9 | IPR009091 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 576 | 799 | 7.0E-51 | - |
| SMART | SM00220 | serkin_6 | 480 | 787 | 2.8E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 480 | 786 | 36.866432 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 486 | 508 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 624 | 636 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 424 | 448 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | NP_001169098.2 | Serine/threonine-protein kinase-like protein CCR4 precursor [Zea mays] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1D6EA41 | Serine/threonine-protein kinase-like protein CCR4 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d003614 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology