Basic Information
Locus ID:
Chr23G010850
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Glycerophosphoryl diester phosphodiesterase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000023 | 9742332 | 9747599 | - | Chr23G010850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd08603 | GDPD_SHV3_repeat_1 | 32 | 326 | 1.95638E-150 | - |
| CDD | cd08604 | GDPD_SHV3_repeat_2 | 349 | 663 | 2.67192E-158 | - |
| Pfam | PF03009 | Glycerophosphoryl diester phosphodiesterase family | 398 | 659 | 8.6E-28 | IPR030395 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 31 | 328 | 4.19E-35 | IPR017946 |
| SUPERFAMILY | SSF51695 | PLC-like phosphodiesterases | 348 | 663 | 1.07E-37 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 347 | 664 | 2.0E-39 | IPR017946 |
| Gene3D | G3DSA:3.20.20.190 | Phosphatidylinositol (PI) phosphodiesterase | 30 | 329 | 7.3E-26 | IPR017946 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 32 | 331 | 27.159363 | IPR030395 |
| ProSiteProfiles | PS51704 | GP-PDE domain profile. | 349 | 664 | 30.399282 | IPR030395 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 733 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 716 | 736 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26690.1 | PLC-like phosphodiesterase family protein. Glycerophosphoryl diester phosphodiesterase-like protein involved in cell wall cellulose accumulation and pectin linking. Impacts root hair, trichome and epidermal cell development. | 0 |
| RefSeq | XP_002446646.1 | glycerophosphodiester phosphodiesterase GDPDL3 [Sorghum bicolor] | 0 |
| Q9SZ11 | Glycerophosphodiester phosphodiesterase GDPDL3 OS=Arabidopsis thaliana OX=3702 GN=GDPDL3 PE=2 SV=3 | 0 | |
| TrEMBL | A0A5J9TW82 | glycerophosphodiester phosphodiesterase OS=Eragrostis curvula OX=38414 GN=EJB05_39160 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology