Basic Information
Locus ID:
Chr23G009470
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000023 | 8544821 | 8551051 | + | Chr23G009470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF48371 | ARM repeat | 43 | 249 | 4.07E-7 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 583 | 628 | 1.65E-7 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 576 | 634 | 6.7E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 397 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 431 | 497 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 679 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 786 | 808 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 559 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 273 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 731 | 777 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 638 | 820 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 347 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_034602583.1 | uncharacterized protein LOC117863099 [Setaria viridis] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A4U6TWQ4 | Tudor domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_7G165000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology