Basic Information
Locus ID:
Chr23G004830
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000023 | 3739263 | 3742655 | + | Chr23G004830 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 34 | 153 | 5.59159E-26 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 176 | 289 | 1.37175E-47 | - |
| Pfam | PF00651 | BTB/POZ domain | 183 | 290 | 5.8E-27 | IPR000210 |
| Pfam | PF00917 | MATH domain | 40 | 152 | 7.5E-8 | IPR002083 |
| SUPERFAMILY | SSF54695 | POZ domain | 169 | 290 | 1.18E-33 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 31 | 165 | 6.87E-32 | - |
| Gene3D | G3DSA:1.25.40.420 | - | 292 | 359 | 5.6E-18 | - |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 31 | 160 | 1.2E-29 | IPR008974 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 165 | 286 | 1.0E-36 | IPR011333 |
| SMART | SM00061 | math_3 | 37 | 138 | 1.7E-11 | IPR002083 |
| SMART | SM00225 | BTB_4 | 190 | 292 | 5.7E-25 | IPR000210 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 190 | 257 | 18.616846 | IPR000210 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 32 | 155 | 20.595497 | IPR002083 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_021319853.1 | BTB/POZ and MATH domain-containing protein 2 [Sorghum bicolor] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A3L6QCP1 | BTB/POZ and MATH domain-containing protein 2-like OS=Panicum miliaceum OX=4540 GN=C2845_PM15G22660 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology