Basic Information
Locus ID:
Chr23G004800
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
meprin and TRAF homology
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000023 | 3719634 | 3720704 | + | Chr23G004800 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00121 | MATH | 30 | 153 | 1.28521E-18 | IPR002083 |
| CDD | cd18280 | BTB_POZ_BPM_plant | 173 | 285 | 6.09758E-46 | - |
| Pfam | PF00651 | BTB/POZ domain | 177 | 285 | 1.2E-26 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 169 | 287 | 3.93E-32 | IPR011333 |
| SUPERFAMILY | SSF49599 | TRAF domain-like | 27 | 162 | 2.29E-25 | - |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 163 | 283 | 1.6E-36 | IPR011333 |
| Gene3D | G3DSA:2.60.210.10 | Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A | 27 | 157 | 7.7E-20 | IPR008974 |
| Gene3D | G3DSA:1.25.40.420 | - | 289 | 355 | 2.4E-19 | - |
| SMART | SM00225 | BTB_4 | 187 | 289 | 3.8E-23 | IPR000210 |
| SMART | SM00061 | math_3 | 33 | 135 | 0.0023 | IPR002083 |
| ProSiteProfiles | PS50144 | MATH/TRAF domain profile. | 28 | 152 | 13.129204 | IPR002083 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 187 | 254 | 17.562063 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G06190.1 | BTB-POZ and MATH domain 2. | 0 |
| RefSeq | XP_039818772.1 | BTB/POZ and MATH domain-containing protein 2-like [Panicum virgatum] | 0 |
| Q9M8J9 | BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=BPM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A4U6TUD9 | Speckle-type POZ protein-like protein OS=Setaria viridis OX=4556 GN=SEVIR_7G256800v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology