Basic Information
Locus ID:
Chr22G016050
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 38455046 | 38457262 | - | Chr22G016050 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 368 | 644 | 1.43344E-85 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 24 | 236 | 3.8211E-57 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 22 | 243 | 1.5E-39 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 364 | 575 | 7.3E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 346 | 661 | 2.32E-73 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 23 | 236 | 3.64E-46 | IPR013320 |
| Gene3D | G3DSA:2.60.120.200 | - | 19 | 248 | 3.6E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 448 | 649 | 1.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 339 | 447 | 8.0E-26 | - |
| SMART | SM00220 | serkin_6 | 362 | 652 | 2.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 362 | 653 | 37.120842 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 494 | 506 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 368 | 391 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 281 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 262 | 277 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_004960359.1 | L-type lectin-domain containing receptor kinase VIII.2 [Setaria italica] | 0 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 0 | |
| TrEMBL | K3Z446 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology