Basic Information
Locus ID:
Chr22G015880
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 38257858 | 38259727 | - | Chr22G015880 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 5 | 44 | 5.3E-8 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 56 | 4.32E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 2 | 49 | 2.4E-8 | - |
| SMART | SM00256 | fbox_2 | 7 | 50 | 9.1E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 49 | 10.636728 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_002439218.1 | uncharacterized protein LOC8068169 isoform X1 [Sorghum bicolor] | 0 |
| TrEMBL | A0A5J9U494 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_34137 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH05.1039 |
| Poaceae | Eleusine coracana subsp. coracana | 6 | gene-QOZ80_5AG0406450, gene-QOZ80_5AG0406460 ... |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_064756, gene-QYE76_064757 |
| Poaceae | Oryza sativa | 1 | LOC_Os04g08460.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G015880 |