Basic Information
Locus ID:
Chr22G015600
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Short Name:
CIPK17
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 37679242 | 37680232 | + | Chr22G015600 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 14 | 44 | 6.78E-5 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 27 | 76 | 5.7E-5 | - |
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48260.2 | - | 0 |
| RefSeq | XP_004960418.1 | CBL-interacting protein kinase 17 [Setaria italica] | 0 |
| Q9LGV5 | CBL-interacting protein kinase 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5J9U2X6 | non-specific serine/threonine protein kinase OS=Eragrostis curvula OX=38414 GN=EJB05_34028 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Apiaceae | Apium graveolens | 3 | Ag5G01794, Ag7G01958, Ag8G01826 |
| Arecaceae | Cocos nucifera | 1 | contig68889702G000010 |
| Asparagaceae | Asparagus officinalis | 2 | AsparagusV1_07.1091.V1.1, AsparagusV1_07.1152.V1.1 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g15840 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G015600 |
| Salicaceae | Populus euphratica | 1 | populus_peu12105 |