Basic Information
Locus ID:
Chr22G012270
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 28080220 | 28080702 | - | Chr22G012270 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 37 | 2.8E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 141 | 1.67E-16 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 142 | 1.7E-16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 160 | 14.746722 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 4 | 16 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 99 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 77 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79250.1 | AGC kinase 1.7. | 0 |
| RefSeq | XP_034585484.1 | serine/threonine-protein kinase RHS3-like [Setaria viridis] | 0 |
| Q1PFB9 | Serine/threonine-protein kinase AGC1-7 OS=Arabidopsis thaliana OX=3702 GN=AGC1-7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U0E9 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_32900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg3253 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg21601 |
| Anacardiaceae | Pistacia vera | 3 | pistato.v30022530, pistato.v30248550, pistato.v30266150 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0243780.1 |
| Poaceae | Oryza coarctata | 1 | Oco03G020330 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G012270 |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G373000 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-19558, nbis-gene-3627, nbis-gene-57387 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_13_RagTag.937 |
| Rhizophoraceae | Carallia pectinifolia | 2 | nbisL1-mrna-25123, nbisL1-mrna-30082 |