Basic Information
Locus ID:
Chr22G011280
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 20576234 | 20581281 | + | Chr22G011280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14003 | STKc_AMPK-like | 97 | 360 | 5.60606E-106 | - |
| Pfam | PF00069 | Protein kinase domain | 98 | 361 | 7.7E-56 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 86 | 372 | 2.16E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 388 | 498 | 1.0E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 88 | 387 | 1.1E-85 | - |
| SMART | SM00220 | serkin_6 | 98 | 361 | 6.7E-88 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 98 | 361 | 46.421017 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 382 | 406 | 9.305907 | IPR018451 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 104 | 131 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 223 | 235 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G30360.1 | SOS3-interacting protein 4. Encodes a SOS2-like protein kinase that is a member of the CBL-interacting protein kinase family.Loss of function mutants show a decrease in sensitivity to high pH.Phosphorylates AHA2, a plasma membrane H+ ATPase.This phosphorylation appears to regulate the activity of the proton transporter. | 0 |
| RefSeq | XP_004962436.1 | CBL-interacting protein kinase 22 [Setaria italica] | 0 |
| Q5KQF5 | CBL-interacting protein kinase 22 OS=Oryza sativa subsp. japonica OX=39947 GN=CIPK22 PE=2 SV=1 | 0 | |
| TrEMBL | K3Z6A5 | non-specific serine/threonine protein kinase OS=Setaria italica OX=4555 GN=101784956 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | BH05.3043 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_5AG0377380, gene-QOZ80_5BG0424530 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0208170.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco10G006990 |
| Poaceae | Oryza sativa | 1 | LOC_Os05g26940.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr22G011280 |
| Poaceae | Thinopyrum elongatum | 1 | Tel2E01G912300 |
| Poaceae | Triticum dicoccoides | 3 | gene_TRIDC2AG074950, gene_TRIDC2BG081980 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2A02G536100.1.cds1, TraesCS2B02G566800.1.cds1 ... |
| Poaceae | Zoysia japonica | 2 | nbis-gene-42240, nbis-gene-42245 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g28013 |