Basic Information
Locus ID:
Chr22G009950
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
NAC domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 15462234 | 15465217 | + | Chr22G009950 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14415 | UBA_NACA_NACP1 | 156 | 201 | 5.76519E-17 | - |
| Pfam | PF19026 | HYPK UBA domain | 162 | 201 | 2.8E-11 | IPR044034 |
| Pfam | PF01849 | NAC domain | 63 | 118 | 5.3E-22 | IPR002715 |
| Gene3D | G3DSA:1.10.8.10 | - | 163 | 200 | 8.8E-19 | - |
| Gene3D | G3DSA:2.20.70.30 | - | 69 | 122 | 2.9E-31 | IPR038187 |
| SMART | SM01407 | NAC_2 | 63 | 119 | 3.7E-26 | IPR002715 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 60 | 125 | 17.612171 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 164 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 71 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 48 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G12390.1 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein. | 0 |
| RefSeq | XP_039838597.1 | nascent polypeptide-associated complex subunit alpha-like protein 1 [Panicum virgatum] | 0 |
| Q9M612 | Nascent polypeptide-associated complex subunit alpha-like protein OS=Pinus taeda OX=3352 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8T0V515 | NAC-A/B domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG266668 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology