Basic Information
Locus ID:
Chr22G006350
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
cation transmembrane transporter activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 6540851 | 6543628 | - | Chr22G006350 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16916 | Dimerisation domain of Zinc Transporter | 234 | 295 | 3.4E-6 | IPR027470 |
| Pfam | PF01545 | Cation efflux family | 75 | 193 | 7.4E-17 | IPR002524 |
| SUPERFAMILY | SSF161111 | Cation efflux protein transmembrane domain-like | 68 | 195 | 3.4E-23 | IPR027469 |
| SUPERFAMILY | SSF160240 | Cation efflux protein cytoplasmic domain-like | 219 | 296 | 2.22E-10 | IPR036837 |
| Gene3D | G3DSA:3.30.70.1350 | Cation efflux protein, cytoplasmic domain | 233 | 297 | 3.2E-11 | IPR036837 |
| Gene3D | G3DSA:1.20.1510.10 | Cation efflux protein transmembrane domain | 72 | 232 | 7.3E-22 | IPR027469 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G39450.1 | Cation efflux family protein. Encodes a Golgi-localized manganese transporter that is involved in Mn tolerance. When expressed into yeast cells, this gene confer Mn<sup>2+</sup> and Cu<sup>2+</sup> tolerance. | 0 |
| RefSeq | XP_034587598.1 | metal tolerance protein 5-like isoform X2 [Setaria viridis] | 0 |
| Q0DHJ5 | Metal tolerance protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=MTP6 PE=2 SV=2 | 0 | |
| TrEMBL | A0A5J9U7Z1 | ZT_dimer domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_35873 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology