Basic Information
Locus ID:
Chr22G006260
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
PWWP domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 6365630 | 6371154 | - | Chr22G006260 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05162 | PWWP | 247 | 333 | 1.27981E-28 | - |
| Pfam | PF00855 | PWWP domain | 247 | 334 | 2.0E-19 | IPR000313 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 243 | 351 | 2.41E-26 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 242 | 340 | 1.5E-24 | - |
| SMART | SM00293 | PWWP_4 | 247 | 308 | 7.6E-11 | IPR000313 |
| ProSiteProfiles | PS50812 | PWWP domain profile. | 249 | 310 | 15.208031 | IPR000313 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1386 | 1401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 838 | 865 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1042 | 1058 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1287 | 1420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1301 | 1315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1402 | 1420 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 920 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1360 | 1385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1036 | 1069 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 891 | 953 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1329 | 1343 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 455 | 486 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G02950.1 | Tudor/PWWP/MBT superfamily protein. | 0 |
| RefSeq | XP_025806246.1 | uncharacterized protein LOC112884854 [Panicum hallii] | 0 |
| Q9LYZ0 | PWWP domain-containing protein 5 OS=Arabidopsis thaliana OX=3702 GN=PDP5 PE=2 SV=1 | 0 | |
| TrEMBL | A0A1E5VVT7 | PWWP domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0009754 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology