Basic Information
Locus ID:
Chr22G006100
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 6098013 | 6116185 | + | Chr22G006100 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14133 | PKc_DYRK_like | 1039 | 1341 | 1.86341E-143 | - |
| CDD | cd05117 | STKc_CAMK | 66 | 324 | 2.43392E-129 | - |
| CDD | cd00051 | EFh | 444 | 506 | 3.31463E-20 | IPR002048 |
| Pfam | PF00069 | Protein kinase domain | 67 | 325 | 1.1E-71 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 1039 | 1341 | 4.9E-52 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 443 | 506 | 6.2E-14 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 371 | 431 | 3.6E-10 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1027 | 1342 | 1.35E-79 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 65 | 326 | 3.37E-85 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 354 | 530 | 1.35E-44 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1033 | 1120 | 3.1E-95 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 334 | 509 | 5.4E-53 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1093 | 1341 | 3.1E-95 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 333 | 3.6E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 69 | 152 | 2.1E-24 | - |
| SMART | SM00220 | serkin_6 | 67 | 325 | 1.2E-96 | IPR000719 |
| SMART | SM00220 | serkin_6 | 1039 | 1341 | 1.1E-74 | IPR000719 |
| SMART | SM00054 | efh_1 | 444 | 472 | 2.3E-4 | IPR002048 |
| SMART | SM00054 | efh_1 | 408 | 436 | 1.3 | IPR002048 |
| SMART | SM00054 | efh_1 | 372 | 400 | 1.4E-7 | IPR002048 |
| SMART | SM00054 | efh_1 | 480 | 508 | 3.4E-6 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 325 | 46.845036 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 368 | 403 | 16.800829 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1039 | 1341 | 38.520111 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 476 | 511 | 14.569197 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 14.150764 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 489 | 501 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1165 | 1177 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 73 | 96 | - | IPR017441 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 381 | 393 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 453 | 465 | - | IPR018247 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 44 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 590 | 623 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.1 | calcium-dependent protein kinase 13. member of Calcium Dependent Protein Kinase | 0 |
| RefSeq | XP_039840903.1 | uncharacterized protein LOC120700731 [Panicum virgatum] | 0 |
| Q6I5I8 | Calcium-dependent protein kinase 16 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK16 PE=3 SV=1 | 0 | |
| TrEMBL | A0A1E5UVL2 | Calcium-dependent protein kinase 13 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0022063 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology