Basic Information
Locus ID:
Chr22G005310
Species & Taxonomic ID:
Sporobolus alterniflorus & 29706
Genome Assembly:
GWHCBIM00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| GWHCBIM00000022 | 4807442 | 4820660 | + | Chr22G005310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 0.00 | 0.00 Da | 0.00 | 0.00 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 706 | 873 | 2.5E-18 | IPR001245 |
| Pfam | PF09775 | Keratinocyte-associated protein 2 | 3 | 91 | 2.6E-11 | IPR018614 |
| SUPERFAMILY | SSF52058 | L domain-like | 89 | 394 | 1.63E-43 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 703 | 879 | 1.39E-38 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 209 | 279 | 2.5E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 280 | 431 | 1.0E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 55 | 208 | 2.6E-28 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 698 | 887 | 4.6E-46 | - |
| SMART | SM00220 | serkin_6 | 623 | 878 | 6.3E-4 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 262 | 284 | 7.419328 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 548 | 878 | 17.983408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 733 | 745 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 890 | 910 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_039837810.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Panicum virgatum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5J9U8X8 | Protein kinase domain-containing protein OS=Eragrostis curvula OX=38414 GN=EJB05_36127 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology